| Transcript ID | Muscle |
|---|---|
| ENST00000584773 | 4.432±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | serine/arginine-rich splicing factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000584773  |
SRSF1-002 |
ENSG00000136450 |
9606 | - |
17:58004588-58007261  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007PL | CIL_0007PL_0001 | UCNEbase | 17:57406597-58005077 |
| CIL_0009DM | CIL_0009DM_0001 | VISTA | 17:57461902-58063720 |
| CIL_0009DL | CIL_0009DL_0001 | VISTA | 17:57574410-58175690 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003729 | IEA | mRNA binding |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0006417 | IEA | regulation of translation |
| GO:0043488 | IEA | regulation of mRNA stability |
| GO:0048024 | IEA | regulation of mRNA splicing, via spliceosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107920
|
Srsf1-006 | protein_coding | Mus_musculus | 0 | 1779 |
|
ENSMUST00000183352
|
SRSF1-201 | protein_coding | Mus_musculus | 0 | 1147 |
|
ENSMUST00000139129
|
Srsf1-001 | protein_coding | Mus_musculus | 0 | 1147 |
|
ENSMUST00000079866
|
Srsf1-003 | protein_coding | Mus_musculus | 0 | 804 |
|
ENSMUST00000171976
|
Srsf1-007 | retained_intron | Mus_musculus | 0 | 523 |
|
ENSDART00000110646
|
srsf1b-201 | protein_coding | Danio_rerio | 0 | 453 |
|
ENSDART00000151683
|
srsf1b-003 | nonsense_mediated_decay | Danio_rerio | 0 | 453 |
|
ENSDART00000143566
|
srsf1b-001 | protein_coding | Danio_rerio | 0 | 453 |
|
ENSMUST00000134824
|
Srsf1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 409 |
|
ENSDART00000140865
|
srsf1b-002 | protein_coding | Danio_rerio | 0 | 375 |
|
ENSMUST00000132983
|
Srsf1-004 | retained_intron | Mus_musculus | 0 | 346 |
|
ENSDART00000080413
|
srsf1a-001 | protein_coding | Danio_rerio | 0 | 331 |
|
ENSDART00000133755
|
srsf1a-004 | protein_coding | Danio_rerio | 0 | 235 |
|
ENSMUST00000172186
|
Srsf1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 224 |
|
ENSDART00000137058
|
srsf1a-003 | retained_intron | Danio_rerio | 0 | 195 |
