C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000080413 srsf1a-001 ENSDARG00000057691 7955 - 15:15091095-15095533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000080413
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000080413 53.484±26.76 17.858±1.29 47.167±16.58 5.007±0.00 7.836±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258962 SRSF1-001 protein_coding Homo_sapiens 0 333
ENST00000581979 SRSF1-004 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000582730 SRSF1-003 protein_coding Homo_sapiens 0 237
ENST00000583741 SRSF1-005 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000584668 SRSF1-008 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000584773 SRSF1-002 protein_coding Homo_sapiens 0 331

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