C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619895 TMC4-001 ENSG00000167608 9606 - 19:54160108-54173171 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000619895
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000619895 1.038±0.00 5.130±3.01 4.115±0.00 0.281±0.00 17.160±0.00 0.360±0.06 7.805±6.06 9.045±4.37 7.526±5.52 1.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GV CIL_0001GV_0001 CGP 19:54155161-54173250
CIL_0001JN CIL_0001JN_0001 CGP 19:54160108-54189882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038743 Tmc4-001 protein_coding Mus_musculus 0 1520
ENSMUST00000121743 Tmc4-002 protein_coding Mus_musculus 0 1513
ENSMUST00000148313 Tmc4-004 retained_intron Mus_musculus 0 710
ENSMUST00000144751 Tmc4-003 retained_intron Mus_musculus 0 558
ENSMUST00000145034 Tmc4-007 retained_intron Mus_musculus 0 392

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