C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167608-ENSG00000125505 CGP 9606 19:54160108-54189882
GeneTranscriptPositionBiotype
ENSG00000125505 (MBOAT7)
membrane bound O-acyltransferase domain containing 7 		ENST00000245615 (MBOAT7-001) 54173415-54189815 protein_coding
ENST00000338624 (MBOAT7-013) 54173415-54189568 protein_coding
ENST00000391754 (MBOAT7-002) 54178337-54189672 protein_coding
ENST00000414665 (MBOAT7-004) 54180859-54189295 protein_coding
ENST00000431666 (MBOAT7-201) 54173413-54189882 protein_coding
ENST00000437868 (MBOAT7-007) 54173412-54189443 nonsense_mediated_decay
ENST00000449249 (MBOAT7-012) 54174074-54188278 protein_coding
ENST00000453320 (MBOAT7-008) 54181116-54189344 protein_coding
ENST00000464098 (MBOAT7-010) 54181124-54188412 retained_intron
ENST00000474910 (MBOAT7-006) 54183521-54189549 processed_transcript
ENST00000491216 (MBOAT7-011) 54186956-54189360 retained_intron
ENST00000494142 (MBOAT7-003) 54173419-54180790 retained_intron
ENST00000495279 (MBOAT7-005) 54179663-54183634 protein_coding
ENST00000495968 (MBOAT7-009) 54187286-54189569 processed_transcript
ENSG00000167608 (TMC4)
transmembrane channel-like 4 		ENST00000446291 (TMC4-002) 54168171-54172752 protein_coding
ENST00000476013 (TMC4-004) 54164539-54171949 processed_transcript
ENST00000495398 (TMC4-006) 54162226-54163267 retained_intron
ENST00000497518 (TMC4-008) 54164552-54168482 retained_intron
ENST00000611183 (TMC4-009) 54160108-54160649 retained_intron
ENST00000613492 (TMC4-003) 54163108-54173160 processed_transcript
ENST00000613723 (TMC4-010) 54160108-54164716 retained_intron
ENST00000615945 (TMC4-007) 54160108-54160972 nonsense_mediated_decay
ENST00000617472 (TMC4-011) 54160165-54173250 protein_coding
ENST00000619895 (TMC4-001) 54160108-54173171 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0001JN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019734-ENSMUSG00000035596 CGP 10090 7:3665790-3693523
GeneTranscriptPositionBiotype
ENSMUSG00000019734 (Tmc4)
transmembrane channel-like gene family 4 		ENSMUST00000038743 (Tmc4-001) 3665790-3677510 protein_coding
ENSMUST00000121743 (Tmc4-002) 3665791-3676793 protein_coding
ENSMUST00000130689 (Tmc4-005) 3675159-3677484 retained_intron
ENSMUST00000136678 (Tmc4-006) 3667442-3670482 retained_intron
ENSMUST00000144751 (Tmc4-003) 3670691-3677524 retained_intron
ENSMUST00000145034 (Tmc4-007) 3665958-3667238 retained_intron
ENSMUST00000148313 (Tmc4-004) 3670674-3676627 retained_intron
ENSMUSG00000035585 (Tsen34)
tRNA splicing endonuclease 34 homolog (S. cerevisiae) 		ENSMUST00000038521 (Tsen34-002) 3693765-3701012 protein_coding
ENSMUST00000108627 (Tsen34-004) 3694523-3701004 protein_coding
ENSMUST00000108629 (Tsen34-003) 3693809-3701004 protein_coding
ENSMUST00000108630 (Tsen34-001) 3693375-3701023 protein_coding
ENSMUST00000123088 (Tsen34-006) 3693602-3695186 protein_coding
ENSMUST00000137204 (Tsen34-008) 3694298-3695093 protein_coding
ENSMUST00000139396 (Tsen34-010) 3694774-3695625 processed_transcript
ENSMUST00000142713 (Tsen34-007) 3693829-3695209 protein_coding
ENSMUST00000147288 (Tsen34-005) 3695349-3695834 processed_transcript
ENSMUST00000155060 (Tsen34-009) 3694508-3700602 nonsense_mediated_decay
ENSMUSG00000035596 (Mboat7)
membrane bound O-acyltransferase domain containing 7 		ENSMUST00000038608 (Mboat7-001) 3677790-3693523 protein_coding
ENSMUST00000118710 (Mboat7-007) 3683677-3693048 protein_coding
ENSMUST00000127106 (Mboat7-008) 3677793-3692118 nonsense_mediated_decay
ENSMUST00000128364 (Mboat7-005) 3678402-3691867 protein_coding
ENSMUST00000131688 (Mboat7-003) 3683358-3692952 retained_intron
ENSMUST00000133223 (Mboat7-006) 3678775-3684528 processed_transcript
ENSMUST00000150684 (Mboat7-004) 3689910-3692938 retained_intron
ENSMUST00000150785 (Mboat7-002) 3689083-3692962 retained_intron
ENSMUSG00000078813 (Leng1)
leukocyte receptor cluster (LRC) member 1 		ENSMUST00000019878 (Leng1-001) 3660098-3665840 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JN_0001ENSG00000125505ENST00000245615ENST00000338624ENST00000391754ENST00000414665ENST00000431666ENST00000437868ENST00000449249ENST00000453320ENST00000464098ENST00000474910ENST00000491216ENST00000494142ENST00000495279ENST00000495968ENSG00000167608ENST00000446291ENST00000476013ENST00000495398ENST00000497518ENST00000611183ENST00000613492ENST00000613723ENST00000615945ENST00000617472ENST00000619895CIL_0001JN_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JN_0001ENSG00000125505ENST00000245615ENST00000338624ENST00000391754ENST00000414665ENST00000437868ENST00000453320ENST00000464098ENST00000494142ENST00000495279ENST00000495968ENSG00000167608ENST00000446291ENST00000476013ENST00000495398ENST00000611183ENST00000613492ENST00000613723ENST00000617472ENST00000619895CIL_0001JN_0002ENSMUSG00000019734ENSMUST00000038743ENSMUST00000121743ENSMUST00000148313ENSMUSG00000035585ENSMUST00000038521ENSMUST00000108627ENSMUST00000108629ENSMUST00000108630ENSMUST00000123088ENSMUST00000142713ENSMUST00000155060ENSMUSG00000035596ENSMUST00000038608ENSMUST00000118710ENSMUST00000127106ENSMUST00000131688ENSMUSG00000078813ENSMUST00000019878
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125505 ENST00000245615 N/A N/A N/A 1.476±0.00 0.776±0.00 5.355±0.00 1.909±0.00 4.105±0.00 2.005±0.00 6.623±0.00 3.224±0.00 25.027±17.24 N/A 7.047±0.00
ENST00000338624 6.789±0.00 6.257±0.00 N/A N/A N/A 7.912±0.00 2.053±0.00 8.901±0.00 3.634±2.32 13.866±0.00 2.802±0.00 N/A N/A 13.590±5.31
ENST00000391754 N/A N/A N/A N/A N/A 1.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414665 N/A N/A 1.414±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437868 14.496±0.00 3.322±0.00 0.322±0.00 17.478±0.00 14.334±0.00 8.613±0.00 0.228±0.00 5.371±0.00 N/A 5.589±0.00 N/A 3.535±2.78 11.813±0.00 14.689±1.30
ENST00000449249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453320 N/A N/A N/A N/A N/A 3.720±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464098 N/A N/A N/A N/A N/A N/A N/A 4.336±0.00 N/A N/A N/A N/A N/A N/A
ENST00000474910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494142 2.837±0.00 2.594±0.00 0.321±0.00 18.427±0.00 2.315±1.99 2.107±1.82 1.319±0.00 6.904±0.00 0.938±0.57 2.692±2.29 0.701±0.00 6.096±4.58 7.606±0.76 6.474±0.09
ENST00000495279 N/A N/A N/A N/A 0.876±0.00 N/A 0.271±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000495968 N/A N/A N/A N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000167608 ENST00000446291 N/A 0.968±0.00 N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000476013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.967±0.00 6.952±0.00 N/A
ENST00000495398 N/A 0.658±0.00 N/A N/A N/A N/A 0.477±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A
ENST00000613492 N/A N/A N/A N/A N/A 3.123±0.00 N/A N/A 1.344±0.00 N/A N/A 2.603±0.00 N/A N/A
ENST00000613723 0.182±0.00 N/A N/A 0.125±0.00 N/A N/A 0.156±0.00 N/A 1.328±0.95 N/A 0.169±0.00 1.251±0.00 N/A 0.530±0.23
ENST00000615945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.385±2.54 N/A N/A
ENST00000619895 N/A N/A 1.038±0.00 N/A 5.130±3.01 4.115±0.00 0.281±0.00 17.160±0.00 0.360±0.06 7.805±6.06 N/A 9.045±4.37 7.526±5.52 1.245±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019734 ENSMUST00000038743 17.212±0.25 N/A 46.617±8.54 N/A 13.389±1.26 115.524±9.51 N/A 14.552±5.89 4.247±0.01 27.141±2.23 N/A 15.091±1.64 24.453±4.35 N/A
ENSMUST00000121743 N/A N/A N/A N/A 13.682±0.00 N/A N/A N/A 1.941±0.58 N/A N/A 16.806±1.58 31.110±1.69 N/A
ENSMUST00000130689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148313 N/A N/A N/A N/A 16.144±5.43 138.792±16.33 N/A 9.800±0.00 N/A 18.463±0.90 N/A 18.022±2.98 N/A N/A
ENSMUSG00000035585 ENSMUST00000038521 N/A N/A N/A N/A N/A N/A 4.765±0.00 N/A 7.167±0.55 N/A 6.218±0.00 21.247±0.00 23.397±3.75 N/A
ENSMUST00000108627 36.357±6.53 97.364±9.48 32.152±5.91 168.012±111.11 35.757±10.54 35.380±4.31 16.825±2.15 29.276±2.56 15.166±4.13 30.081±3.22 8.953±1.83 54.168±12.67 40.998±2.76 5.016±0.37
ENSMUST00000108629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.237±0.00 N/A 19.516±3.43 1.545±0.00
ENSMUST00000108630 N/A N/A 10.498±2.40 24.416±1.75 N/A N/A 7.974±2.20 N/A 6.935±0.80 N/A 3.921±0.33 N/A 19.265±1.75 N/A
ENSMUST00000123088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 82.598±0.00 5.455±0.00
ENSMUST00000137204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.517±0.00 62.217±0.00 N/A
ENSMUST00000147288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.179±0.00 27.020±0.00 2.919±0.00
ENSMUSG00000035596 ENSMUST00000038608 8.903±3.26 N/A 7.507±1.48 11.337±0.94 6.594±0.58 11.034±0.00 3.849±0.87 9.611±2.24 5.425±0.97 N/A 2.977±0.84 9.189±0.00 9.662±0.00 3.074±0.19
ENSMUST00000118710 N/A 56.627±7.75 N/A N/A 20.045±6.19 19.403±2.03 N/A 16.786±0.51 9.939±1.76 15.902±3.71 N/A 24.634±6.79 N/A N/A
ENSMUST00000127106 N/A 25.264±0.92 5.133±0.00 15.758±0.00 9.531±3.04 14.775±2.76 N/A 11.224±1.19 8.471±1.91 13.128±0.35 N/A 19.894±5.66 13.122±7.61 1.617±0.10
ENSMUST00000128364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131688 5.985±1.78 N/A 2.671±0.00 8.787±0.92 4.554±1.06 N/A N/A 5.048±0.00 2.699±0.44 N/A N/A 7.917±0.72 3.617±0.00 0.787±0.00
ENSMUST00000133223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078813 ENSMUST00000019878 8.179±1.93 9.022±0.65 16.590±3.75 7.313±1.25 8.623±0.60 N/A 5.008±1.31 9.183±1.74 6.371±2.13 N/A 3.706±0.35 14.693±4.72 18.055±6.49 5.906±0.50

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