| Transcript ID | Bladder |
|---|---|
| ENST00000397296 | 1.623±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 6 (neurotransmitter transporter), member 12 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000397296  |
SLC6A12-201 |
ENSG00000111181 |
9606 | - |
12:190077-210605  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00083Y | CIL_00083Y_0001 | VISTA | 12:106900-709490 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005328 | IEA | neurotransmitter:sodium symporter activity |
| GO:0005332 | IEA | gamma-aminobutyric acid:sodium symporter activity |
| GO:0005886 | TAS | plasma membrane |
| GO:0005887 | IEA | integral component of plasma membrane |
| GO:0006810 | TAS | transport |
| GO:0006811 | TAS | ion transport |
| GO:0006836 | IEA | neurotransmitter transport |
| GO:0006865 | TAS | amino acid transport |
| GO:0007268 | TAS | synaptic transmission |
| GO:0007269 | TAS | neurotransmitter secretion |
| GO:0015812 | IEA | gamma-aminobutyric acid transport |
| GO:0016021 | TAS:IEA | integral component of membrane |
| GO:0055085 | IEA:TAS | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000032200
|
Slc6a12-002 | protein_coding | Mus_musculus | 0 | 2036 |
|
ENSMUST00000166457
|
Slc6a12-001 | protein_coding | Mus_musculus | 0 | 2010 |
|
ENSMUST00000171008
|
Slc6a12-007 | protein_coding | Mus_musculus | 0 | 1807 |
|
ENSMUST00000165456
|
Slc6a12-008 | nonsense_mediated_decay | Mus_musculus | 0 | 887 |
|
ENSMUST00000170339
|
Slc6a12-005 | retained_intron | Mus_musculus | 0 | 850 |
|
ENSMUST00000171874
|
Slc6a12-004 | retained_intron | Mus_musculus | 0 | 839 |
|
ENSMUST00000064580
|
Slc6a13-001 | protein_coding | Mus_musculus | 0 | 822 |
|
ENSMUST00000170582
|
Slc6a12-006 | retained_intron | Mus_musculus | 0 | 678 |
|
ENSMUST00000142021
|
Slc6a13-003 | processed_transcript | Mus_musculus | 0 | 636 |
|
ENSMUST00000163771
|
Slc6a12-009 | nonsense_mediated_decay | Mus_musculus | 0 | 492 |
|
ENSMUST00000166390
|
Slc6a12-010 | nonsense_mediated_decay | Mus_musculus | 0 | 438 |
|
ENSMUST00000142419
|
Slc6a13-004 | protein_coding | Mus_musculus | 0 | 263 |
|
ENSMUST00000168295
|
Slc6a12-003 | protein_coding | Mus_musculus | 0 | 200 |
|
ENSMUST00000142144
|
Slc6a13-002 | retained_intron | Mus_musculus | 7e-29 | 134 |
