C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166390 Slc6a12-010 ENSMUSG00000030109 10090 + 6:121347419-121355326 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLungMuscleOvaryPlacentaENSMUST00000166390
Transcript ID Adrenal Brain Colon Lung Muscle Ovary Placenta
ENSMUST00000166390 0.171±0.00 0.632±0.00 0.496±0.00 0.368±0.00 0.155±0.00 0.398±0.28 9.635±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359674 SLC6A12-001 protein_coding Homo_sapiens 0 438
ENST00000397296 SLC6A12-201 protein_coding Homo_sapiens 0 438
ENST00000424061 SLC6A12-002 protein_coding Homo_sapiens 0 438
ENST00000535347 SLC6A12-008 protein_coding Homo_sapiens 0 230
ENST00000536116 SLC6A12-007 processed_transcript Homo_sapiens 0 394
ENST00000536824 SLC6A12-004 protein_coding Homo_sapiens 0 438
ENST00000537793 SLC6A12-005 protein_coding Homo_sapiens 0 278
ENST00000538272 SLC6A12-009 processed_transcript Homo_sapiens 7.00649e-43 178
ENST00000540094 SLC6A12-015 retained_intron Homo_sapiens 0 204

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