C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serine/arginine-rich splicing factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000585096  |
SRSF1-006 |
ENSG00000136450 |
9606 | - |
17:58004822-58007273  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007PL | CIL_0007PL_0001 | UCNEbase | 17:57406597-58005077 |
| CIL_0009DM | CIL_0009DM_0001 | VISTA | 17:57461902-58063720 |
| CIL_0009DL | CIL_0009DL_0001 | VISTA | 17:57574410-58175690 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000183352
|
SRSF1-201 | protein_coding | Mus_musculus | 0 | 387 |
|
ENSMUST00000139129
|
Srsf1-001 | protein_coding | Mus_musculus | 0 | 387 |
|
ENSMUST00000107920
|
Srsf1-006 | protein_coding | Mus_musculus | 0 | 342 |
|
ENSMUST00000079866
|
Srsf1-003 | protein_coding | Mus_musculus | 0 | 342 |
|
ENSMUST00000171976
|
Srsf1-007 | retained_intron | Mus_musculus | 0 | 329 |
|
ENSMUST00000132983
|
Srsf1-004 | retained_intron | Mus_musculus | 0 | 224 |
|
ENSMUST00000172186
|
Srsf1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 224 |
|
ENSMUST00000134824
|
Srsf1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 224 |
