C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cancer susceptibility candidate 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526913 CASC5-013 ENSG00000137812 9606 + 15:40623132-40664339 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000526913
Transcript ID Bladder Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000526913 0.160±0.00 0.649±0.00 0.110±0.03 0.028±0.00 0.019±0.00 0.010±0.00 0.845±0.81 0.585±0.00 9.454±4.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070F CIL_00070F_0001 CGP 15:40569300-40664342

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099542 Casc5-201 protein_coding Mus_musculus 0 2002
ENSMUST00000028802 Casc5-004 protein_coding Mus_musculus 0 2002
ENSMUST00000028799 Casc5-001 protein_coding Mus_musculus 0.00000001 68

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