C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455134 GAPDHP28-001 ENSG00000213449 9606 - 10:91666780-91667782 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungMuscleTestisENST00000455134
Transcript ID Adrenal Brain Lung Muscle Testis
ENST00000455134 0.031±0.00 0.016±0.00 0.014±0.00 0.076±0.00 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L8 CIL_0008L8_0001 VISTA 10:91288732-91891966
CIL_00018M CIL_00018M_0001 CGP 10:91628442-91865276

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 887
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 887
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 887
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 887
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 878
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 870
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 861
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 859
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 859
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 850
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 845
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 802
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 795
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 780
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 765
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 765
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 765
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000121385 Gm12464-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000183064 Gm7497-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000182253 Gm5205-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 603
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 603
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000122157 Gm12634-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000121515 Gm13466-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000118175 Gm11929-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000182468 Gm7656-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000182326 Gm8254-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000147954 Gapdh-006 retained_intron Mus_musculus 0 287
ENSMUST00000182938 Gm9556-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000121919 Gm14491-001 processed_pseudogene Mus_musculus 2e-30 137
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 6e-25 119

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