C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 26956
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182176 Gm26956-001 ENSMUSG00000098110 10090 + 13:11939558-11940543 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000182176
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000182176 0.033±0.00 0.093±0.01 0.026±0.01 0.050±0.00 0.199±0.00 0.071±0.00 0.867±0.36 0.019±0.00 0.039±0.00 0.064±0.00 0.230±0.14 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LI CIL_0000LI_0002 CGP 13:9875486-12106945
CIL_0008J8 CIL_0008J8_0002 VISTA 13:11813964-12415326
CIL_0008J9 CIL_0008J9_0002 VISTA 13:11824772-12428580
CIL_0008IY CIL_0008IY_0002 VISTA 13:11831518-12433920

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 869
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 664
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 869
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 869
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 869
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 403
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 682
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 477
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 640
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 774
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 651
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 656
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 843
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 621
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 412
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 664
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 664
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 643
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 647
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 628
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 473
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 571
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 726
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 682
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 399
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 800

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