C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9556
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182938 Gm9556-001 ENSMUSG00000098225 10090 + 16:32726666-32727605 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMusclePlacentaTestisENSMUST00000182938
Transcript ID Bladder Brain Liver Muscle Placenta Testis
ENSMUST00000182938 0.046±0.00 0.018±0.00 0.006±0.00 0.084±0.03 0.060±0.03 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 438
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 398
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 438
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 438
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 438
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 239
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 385
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 278
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 231
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 219
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 399
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 399
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 294
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 307
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 324
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 422

Loading