C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, sigma 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443943 AP1S1-003 ENSG00000106367 9606 + 7:101154483-101161596 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000443943
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000443943 2.360±0.00 8.324±0.00 1.896±0.00 1.446±0.00 0.441±0.00 1.791±0.00 1.345±0.00 0.597±0.40 30.015±34.63 23.456±10.91 6.997±2.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0005905 IEA coated pit
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0006898 TAS receptor-mediated endocytosis
GO:0008565 IEA protein transporter activity
GO:0009615 IEP response to virus
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030121 TAS AP-1 adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111080 Ap1s1-001 protein_coding Mus_musculus 0 678
ENSMUST00000144303 Ap1s1-005 protein_coding Mus_musculus 0 612
ENSMUST00000150603 Ap1s1-002 protein_coding Mus_musculus 0 575
ENSMUST00000154183 Ap1s1-004 retained_intron Mus_musculus 0 252
ENSMUST00000129356 Ap1s1-003 protein_coding Mus_musculus 0 241
ENSDART00000038228 ap1s3b-001 protein_coding Danio_rerio 6e-39 165

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