C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, sigma 3 subunit, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000038228 ap1s3b-001 ENSDARG00000027966 7955 - 2:47709966-47743534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000038228
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000038228 3.056±0.99 1.624±0.09 16.464±2.51 0.914±0.00 0.977±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AM CIL_0004AM_0002 CGP 2:47704725-47743534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337619 AP1S1-001 protein_coding Homo_sapiens 1e-38 165
ENST00000429457 AP1S1-004 protein_coding Homo_sapiens 4e-39 165
ENST00000443943 AP1S1-003 nonsense_mediated_decay Homo_sapiens 6e-39 165

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