C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor protein complex AP-1, sigma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111080 Ap1s1-001 ENSMUSG00000004849 10090 - 5:137034993-137046135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111080
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111080 18.075±3.40 6.481±0.94 30.237±5.27 37.887±18.35 9.138±1.42 20.654±2.97 7.333±1.87 19.932±6.17 25.485±16.55 10.528±2.37 8.740±1.63 9.948±6.07 48.120±31.54 5.850±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LE CIL_0005LE_0002 CGP 5:137034993-137072272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 NAS trans-Golgi network
GO:0005905 IEA coated pit
GO:0006886 NAS intracellular protein transport
GO:0008565 NAS protein transporter activity
GO:0009615 IEA response to virus
GO:0016020 IEA membrane
GO:0016192 NAS vesicle-mediated transport
GO:0030121 NAS AP-1 adaptor complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337619 AP1S1-001 protein_coding Homo_sapiens 0 928
ENST00000429457 AP1S1-004 protein_coding Homo_sapiens 0 599
ENST00000443943 AP1S1-003 nonsense_mediated_decay Homo_sapiens 0 678

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