C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor protein complex AP-1, sigma 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004849 Ap1s1 10090 - 5:137034993-137046135 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111080 Ap1s1-001 137034993-137046135 protein_coding
  ENSMUST00000129356 Ap1s1-003 137043069-137045407 protein_coding
  ENSMUST00000144303 Ap1s1-005 137037396-137046042 protein_coding
  ENSMUST00000150603 Ap1s1-002 137037379-137045795 protein_coding
  ENSMUST00000154183 Ap1s1-004 137035342-137037650 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111080ENSMUST00000144303ENSMUST00000154183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111080 18.075±3.40 6.481±0.94 30.237±5.27 37.887±18.35 9.138±1.42 20.654±2.97 7.333±1.87 19.932±6.17 25.485±16.55 10.528±2.37 8.740±1.63 9.948±6.07 48.120±31.54 5.850±2.87
ENSMUST00000144303 24.331±2.64 N/A 16.466±2.29 175.889±0.00 18.082±4.49 N/A 7.224±1.12 15.521±0.00 7.863±0.00 N/A 2.857±0.37 21.925±12.36 78.683±43.45 6.681±1.43
ENSMUST00000154183 N/A 13.377±3.61 N/A 24.431±0.00 8.052±2.07 14.176±1.61 N/A N/A 2.751±0.75 N/A 2.776±0.00 9.745±2.96 N/A 0.838±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LE CIL_0005LE_0002 CGP 5:137034993-137072272

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 NAS trans-Golgi network
GO:0005905 IEA coated pit
GO:0006886 NAS intracellular protein transport
GO:0008565 NAS protein transporter activity
GO:0009615 IEA response to virus
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 NAS vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030121 NAS AP-1 adaptor complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056803 ap1s1 adaptor-related protein complex 1, sigma 1 subunit protein_coding Danio_rerio
ENSG00000106367 AP1S1 adaptor-related protein complex 1, sigma 1 subunit protein_coding Homo_sapiens

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