C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000136697 cnot3b-001 ENSDARG00000019842 7955 - 19:10877759-10917709 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000136697
Transcript ID Heart Kidney
ENSDART00000136697 1.709±0.00 2.907±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038913 Cnot3-002 protein_coding Mus_musculus 0 385
ENSMUST00000129973 Cnot3-005 retained_intron Mus_musculus 0 385
ENSMUST00000143085 Cnot3-001 retained_intron Mus_musculus 0 385
ENSMUST00000144097 Cnot3-004 retained_intron Mus_musculus 7e-27 126
ENSMUST00000160200 Cnot3-007 protein_coding Mus_musculus 9e-26 121
ENST00000221232 CNOT3-001 protein_coding Homo_sapiens 0 424
ENST00000358389 CNOT3-003 protein_coding Homo_sapiens 0 424
ENST00000447684 CNOT3-201 protein_coding Homo_sapiens 0 244
ENST00000457463 CNOT3-006 protein_coding Homo_sapiens 0 326
ENST00000471126 CNOT3-011 protein_coding Homo_sapiens 9e-31 137
ENST00000496327 CNOT3-010 processed_transcript Homo_sapiens 3e-27 126
ENST00000610829 CNOT3-217 protein_coding Homo_sapiens 0 244
ENST00000610883 CNOT3-211 protein_coding Homo_sapiens 0 424
ENST00000611252 CNOT3-214 protein_coding Homo_sapiens 0 424
ENST00000611667 CNOT3-224 protein_coding Homo_sapiens 0 244
ENST00000612029 CNOT3-002 retained_intron Homo_sapiens 0 326
ENST00000612466 CNOT3-006 retained_intron Homo_sapiens 9e-31 137
ENST00000612924 CNOT3-205 protein_coding Homo_sapiens 0 424
ENST00000613028 CNOT3-011 protein_coding Homo_sapiens 9e-31 137
ENST00000613073 CNOT3-005 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000613470 CNOT3-010 processed_transcript Homo_sapiens 3e-27 126
ENST00000613528 CNOT3-225 protein_coding Homo_sapiens 0 424
ENST00000613636 CNOT3-208 protein_coding Homo_sapiens 0 244
ENST00000613752 CNOT3-202 protein_coding Homo_sapiens 0 424
ENST00000614542 CNOT3-005 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000614598 CNOT3-212 protein_coding Homo_sapiens 0 244
ENST00000614649 CNOT3-206 protein_coding Homo_sapiens 0 424
ENST00000615030 CNOT3-209 protein_coding Homo_sapiens 0 424
ENST00000615034 CNOT3-003 retained_intron Homo_sapiens 2.8026e-45 187
ENST00000615038 CNOT3-005 retained_intron Homo_sapiens 2e-33 148
ENST00000615532 CNOT3-006 protein_coding Homo_sapiens 0 326
ENST00000615629 CNOT3-003 retained_intron Homo_sapiens 2.8026e-45 187
ENST00000616102 CNOT3-220 protein_coding Homo_sapiens 0 244
ENST00000616264 CNOT3-004 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000616359 CNOT3-210 protein_coding Homo_sapiens 0 424
ENST00000616910 CNOT3-226 protein_coding Homo_sapiens 0 424
ENST00000617218 CNOT3-207 protein_coding Homo_sapiens 0 244
ENST00000617371 CNOT3-006 retained_intron Homo_sapiens 9e-31 137
ENST00000617930 CNOT3-007 retained_intron Homo_sapiens 2e-33 148
ENST00000617936 CNOT3-002 retained_intron Homo_sapiens 0 244
ENST00000617982 CNOT3-001 protein_coding Homo_sapiens 0 424
ENST00000618130 CNOT3-005 retained_intron Homo_sapiens 2e-33 148
ENST00000618405 CNOT3-221 protein_coding Homo_sapiens 0 424
ENST00000618717 CNOT3-001 protein_coding Homo_sapiens 0 285
ENST00000618939 CNOT3-002 retained_intron Homo_sapiens 0 326
ENST00000619316 CNOT3-001 protein_coding Homo_sapiens 0 285
ENST00000619347 CNOT3-203 protein_coding Homo_sapiens 0 244
ENST00000619557 CNOT3-215 protein_coding Homo_sapiens 0 244
ENST00000619567 CNOT3-216 protein_coding Homo_sapiens 0 424
ENST00000619854 CNOT3-204 protein_coding Homo_sapiens 0 424
ENST00000620060 CNOT3-222 protein_coding Homo_sapiens 0 424
ENST00000620419 CNOT3-218 protein_coding Homo_sapiens 0 424
ENST00000620573 CNOT3-219 protein_coding Homo_sapiens 0 424
ENST00000620970 CNOT3-003 protein_coding Homo_sapiens 0 424
ENST00000621174 CNOT3-002 retained_intron Homo_sapiens 0 244
ENST00000622080 CNOT3-004 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000622131 CNOT3-213 protein_coding Homo_sapiens 0 424
ENST00000622193 CNOT3-223 protein_coding Homo_sapiens 0 244
ENST00000622342 CNOT3-007 retained_intron Homo_sapiens 2e-33 148

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