C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000000838 slc6a13l-201 ENSDARG00000001354 7955 + 6:41078154-41091883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000000838
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000000838 0.226±0.22 4.887±3.45 9.031±2.78 0.712±0.00 0.536±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343164 SLC6A13-001 protein_coding Homo_sapiens 0 291
ENST00000445055 SLC6A13-201 protein_coding Homo_sapiens 0 259
ENST00000542379 SLC6A13-015 processed_transcript Homo_sapiens 6e-26 121
ENST00000546319 SLC6A13-004 protein_coding Homo_sapiens 9e-26 121

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