C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter), member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546319 SLC6A13-004 ENSG00000010379 9606 - 12:235194-262873 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Y CIL_00083Y_0001 VISTA 12:106900-709490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006836 IEA neurotransmitter transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064580 Slc6a13-001 protein_coding Mus_musculus 0 327
ENSMUST00000142021 Slc6a13-003 processed_transcript Mus_musculus 0 313
ENSMUST00000142144 Slc6a13-002 retained_intron Mus_musculus 0 313
ENSMUST00000142419 Slc6a13-004 protein_coding Mus_musculus 0 292
ENSMUST00000171008 Slc6a12-007 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000032200 Slc6a12-002 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000166457 Slc6a12-001 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000168295 Slc6a12-003 protein_coding Mus_musculus 2e-28 130
ENSDART00000000838 slc6a13l-201 protein_coding Danio_rerio 9e-26 121
ENSDART00000143577 slc6a13l-001 protein_coding Danio_rerio 9e-26 121
ENSDART00000092131 si:ch211-117c9.5-001 protein_coding Danio_rerio 0.00000002 64

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