C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM and senescent cell antigen-like domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612860 LIMS2-201 ENSG00000072163 9606 - 2:127638430-127644112 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastMuscleOvaryPlacentaENST00000612860
Transcript ID Adrenal Breast Muscle Ovary Placenta
ENST00000612860 17.534±0.00 21.779±0.00 1.831±0.00 18.079±0.00 15.478±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000197 CIL_000197_0001 CGP 2:127638381-127681786

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025254 Lims2-201 protein_coding Mus_musculus 0 841
ENSDART00000033980 lims1-201 protein_coding Danio_rerio 0 599
ENSMUST00000105468 Lims1-003 protein_coding Mus_musculus 0 438
ENSMUST00000020078 Lims1-001 protein_coding Mus_musculus 0 438
ENSMUST00000020077 Lims1-002 protein_coding Mus_musculus 0 370
ENSMUST00000119116 Gm15665-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000148799 Lims1-005 processed_transcript Mus_musculus 5e-23 113

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