C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 domain trafficking protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543425 TMED2-006 ENSG00000086598 9606 + 12:123584549-123597342 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonMuscleOvaryPlacentaTestisENST00000543425
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Muscle Ovary Placenta Testis
ENST00000543425 42.044±0.00 15.597±0.00 4.807±0.00 27.340±0.00 45.494±0.00 8.648±0.00 2.640±0.00 38.779±0.00 27.879±0.00 23.701±12.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003J9 CIL_0003J9_0001 CGP 12:123470054-123598577
CIL_0003J8 CIL_0003J8_0001 CGP 12:123584531-123620941

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060226 Tmed2-001 protein_coding Mus_musculus 0 686
ENSMUST00000140299 Tmem5-001 protein_coding Mus_musculus 0 647
ENSMUST00000182663 Gm10698-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000135464 Tmed2-002 protein_coding Mus_musculus 0 470
ENSMUST00000124529 Tmed2-003 protein_coding Mus_musculus 0 394

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