C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 domain trafficking protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135464 Tmed2-002 ENSMUSG00000029390 10090 + 5:124543080-124550496 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000135464
Transcript ID Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000135464 22.522±11.82 15.953±7.80 11.146±0.09 32.322±0.00 46.616±8.62 47.019±16.91 76.620±12.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003J9 CIL_0003J9_0002 CGP 5:124493082-124550506
CIL_0003J8 CIL_0003J8_0002 CGP 5:124540695-124569660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262225 TMED2-001 protein_coding Homo_sapiens 0 662
ENST00000438031 TMED2-003 protein_coding Homo_sapiens 0 305
ENST00000460282 RP11-641C17.3-001 processed_pseudogene Homo_sapiens 0 285
ENST00000509052 TMED2-004 protein_coding Homo_sapiens 0 660
ENST00000543425 TMED2-006 retained_intron Homo_sapiens 0 470

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