C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 1, r subcomponent
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542285 C1R-001 ENSG00000159403 9606 - 12:7080209-7092607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000542285
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000542285 98.812±0.00 2.871±2.22 17.149±0.00 49.690±41.98 17.562±15.78 72.752±25.24 10.603±0.00 41.346±0.00 6.587±0.00 266.969±269.84 15.635±5.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001H CIL_00001H_0001 CGP 12:6988259-7092607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 EXP:IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 NAS extracellular region
GO:0006508 IEA proteolysis
GO:0006955 TAS immune response
GO:0006956 TAS complement activation
GO:0006958 TAS complement activation, classical pathway
GO:0008236 TAS serine-type peptidase activity
GO:0045087 TAS innate immune response
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068593 C1ra-201 protein_coding Mus_musculus 0 2113
ENSMUST00000184647 C1rb-001 protein_coding Mus_musculus 0 2061

Loading