C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 2, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526541 TRPC2-002 ENSG00000182048 9606 + 11:3626484-3637559 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000526541
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000526541 0.219±0.00 0.098±0.00 0.023±0.00 0.187±0.00 0.054±0.00 0.317±0.17 0.036±0.00 0.879±0.00 0.170±0.09 0.148±0.10 0.123±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124189 TRPC2-008 protein_coding Mus_musculus 0 274
ENSMUST00000094129 Trpc2-201 protein_coding Mus_musculus 0 274
ENSMUST00000139104 Trpc2-004 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000155078 Trpc2-003 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000084843 Trpc2-001 protein_coding Mus_musculus 0 274
ENSMUST00000123372 Trpc2-002 nonsense_mediated_decay Mus_musculus 0 274

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