C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin filament associated protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513665 AFAP1L1-004 ENSG00000157510 9606 + 5:149315640-149341802 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyOvaryPlacentaTestisENST00000513665
Transcript ID Adrenal Brain Colon Kidney Ovary Placenta Testis
ENST00000513665 2.464±0.00 0.345±0.00 1.557±0.00 0.279±0.00 2.124±0.00 6.594±0.00 1.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZC CIL_0007ZC_0001 VISTA 5:149122130-149725513
CIL_0001GD CIL_0001GD_0003 CGP 5:149141483-149341802
CIL_000851 CIL_000851_0001 VISTA 5:149141792-149745303

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120472 Afap1l1-001 protein_coding Mus_musculus 0 1445
ENSMUST00000154876 Afap1l1-003 nonsense_mediated_decay Mus_musculus 0 1445
ENSMUST00000147278 Afap1l1-002 retained_intron Mus_musculus 0 1391
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000000000002 86

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