C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin filament associated protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147278 Afap1l1-002 ENSMUSG00000033032 10090 - 18:61730939-61786660 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000147278
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000147278 2.139±0.53 1.267±0.31 6.133±0.00 2.008±0.00 1.723±0.00 0.422±0.10 13.551±2.01 2.605±1.13 16.065±8.10 1.488±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000851 CIL_000851_0002 VISTA 18:61337492-61938739
CIL_0007ZC CIL_0007ZC_0002 VISTA 18:61351102-61954077
CIL_0001B2 CIL_0001B2_0002 CGP 18:61712440-61786702
CIL_0001F8 CIL_0001F8_0002 CGP 18:61730261-61911852

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296721 AFAP1L1-001 protein_coding Homo_sapiens 0 1391
ENST00000455574 AFAP1L1-003 retained_intron Homo_sapiens 0 1136
ENST00000513665 AFAP1L1-004 retained_intron Homo_sapiens 0 1391
ENST00000515000 AFAP1L1-002 protein_coding Homo_sapiens 0 1212
ENST00000522492 AFAP1L1-006 processed_transcript Homo_sapiens 0 359

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