C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 4E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450979 KDM4E-001 ENSG00000235268 9606 + 11:95025258-95027596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverLungOvaryPlacentaTestisENST00000450979
Transcript ID Adrenal Colon Liver Lung Ovary Placenta Testis
ENST00000450979 0.028±0.00 0.068±0.00 0.021±0.00 0.121±0.00 0.037±0.01 0.035±0.01 0.056±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115647 Kdm4d-002 protein_coding Mus_musculus 0 804
ENSMUST00000058796 Kdm4d-001 protein_coding Mus_musculus 0 804
ENSMUST00000184843 Gm27205-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000086835 Kdm4b-002 protein_coding Mus_musculus 0 388
ENSMUST00000025036 Kdm4b-001 protein_coding Mus_musculus 0 388
ENSMUST00000139679 Kdm4b-004 protein_coding Mus_musculus 0 243

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