C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 4D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115647 Kdm4d-002 ENSMUSG00000053914 10090 - 9:14463210-14500400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115647
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115647 0.087±0.06 0.225±0.12 0.144±0.01 0.048±0.00 0.040±0.02 0.043±0.01 0.010±0.01 0.041±0.02 0.030±0.01 0.220±0.12 0.033±0.02 1.809±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0033169 IMP histone H3-K9 demethylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000034084 kdm4b-201 protein_coding Danio_rerio 0 324
ENSDART00000128161 kdm4b-001 protein_coding Danio_rerio 0 324
ENST00000335080 KDM4D-001 protein_coding Homo_sapiens 0 1044
ENST00000450979 KDM4E-001 protein_coding Homo_sapiens 0 804
ENST00000536741 KDM4D-002 protein_coding Homo_sapiens 0 1044
ENST00000545950 RP11-735A19.2-001 unprocessed_pseudogene Homo_sapiens 0 822
ENST00000610872 KDM4D-201 protein_coding Homo_sapiens 0 1044

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