C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: argonaute RISC catalytic component 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373206 AGO1-001 ENSG00000092847 9606 + 1:35869808-35920958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000373206
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000373206 1.432±0.00 1.159±0.00 0.964±0.00 1.427±0.58 0.724±0.00 3.166±0.00 0.973±0.00 0.620±0.00 2.136±0.00 0.750±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0031047 IEA gene silencing by RNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097888 Ago1-001 protein_coding Mus_musculus 0 5040
ENSMUST00000127800 Ago1-002 nonsense_mediated_decay Mus_musculus 0 4228
ENSMUST00000176315 Ago1-005 protein_coding Mus_musculus 0 2396
ENSDART00000156255 AGO1-001 protein_coding Danio_rerio 0 1993
ENSDART00000138318 AGO1-201 protein_coding Danio_rerio 0 1929
ENSDART00000091813 ago3b-001 protein_coding Danio_rerio 0 1448
ENSMUST00000069097 Ago3-001 protein_coding Mus_musculus 0 1243
ENSMUST00000156533 Ago1-004 retained_intron Mus_musculus 0 399
ENSMUST00000149425 Ago1-003 retained_intron Mus_musculus 0 300

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