C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily D, polypeptide 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360124 CYP2D6-003 ENSG00000100197 9606 - 22:42126499-42129909 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungOvaryPlacentaTestisENST00000360124
Transcript ID Adipose Colon Liver Lung Ovary Placenta Testis
ENST00000360124 0.099±0.00 0.199±0.00 0.493±0.00 0.042±0.00 0.367±0.00 0.109±0.04 0.895±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BK CIL_0004BK_0001 CGP 22:42085525-42130906
CIL_0004LO CIL_0004LO_0001 CGP 22:42126499-42343616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016712 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023083 Cyp2d22-201 protein_coding Mus_musculus 0 630
ENSMUST00000072776 Cyp2d10-201 protein_coding Mus_musculus 0 577
ENSMUST00000006094 Cyp2d26-201 protein_coding Mus_musculus 0 555
ENSMUST00000170255 Cyp2d11-201 protein_coding Mus_musculus 0 544
ENSMUST00000089129 Cyp2d9-201 protein_coding Mus_musculus 0 532
ENSMUST00000068861 Cyp2d12-201 protein_coding Mus_musculus 0 527
ENSMUST00000109515 Cyp2d34-201 protein_coding Mus_musculus 0 516
ENSMUST00000180453 Cyp2d41-ps-001 unprocessed_pseudogene Mus_musculus 0 512
ENSMUST00000055721 Cyp2d40-201 protein_coding Mus_musculus 0 499

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