Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_0004LO_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000100197-ENSG00000100207	CGP	9606	22:42126499-42343616
Gene	Transcript	Position	Biotype
ENSG00000100197 (CYP2D6) cytochrome P450, family 2, subfamily D, polypeptide 6	ENST00000359033 (CYP2D6-002)	42126556-42130865	protein_coding
	ENST00000360124 (CYP2D6-003)	42126499-42129909	nonsense_mediated_decay
	ENST00000360608 (CYP2D6-001)	42126499-42130906	protein_coding
	ENST00000389970 (CYP2D6-201)	42126501-42130881	protein_coding
	ENST00000488442 (CYP2D6-004)	42126535-42130813	retained_intron
ENSG00000100207 (TCF20) transcription factor 20 (AR1)	ENST00000335626 (TCF20-002)	42161056-42215440	protein_coding
	ENST00000359486 (TCF20-001)	42160013-42215442	protein_coding
	ENST00000404876 (TCF20-003)	42161098-42210208	protein_coding
	ENST00000515426 (TCF20-004)	42214847-42343616	protein_coding
ENSG00000182057 (OGFRP1) opioid growth factor receptor pseudogene 1	ENST00000332965 (OGFRP1-001)	42269753-42274862	lincRNA
	ENST00000415205 (OGFRP1-002)	42269760-42275196	lincRNA
	ENST00000446578 (OGFRP1-003)	42269768-42275033	lincRNA
ENSG00000205702 (CYP2D7P) cytochrome P450, family 2, subfamily D, polypeptide 7 (gene/pseudogene)	ENST00000358097 (CYP2D7P-002)	42140203-42144549	polymorphic_pseudogene
	ENST00000424775 (CYP2D7P-006)	42142737-42143999	processed_transcript
	ENST00000433992 (CYP2D7P-008)	42140203-42144577	polymorphic_pseudogene
	ENST00000435101 (CYP2D7P-004)	42140203-42141924	nonsense_mediated_decay
	ENST00000435688 (CYP2D7P-005)	42143284-42144549	retained_intron
	ENST00000610593 (CYP2D7P-007)	42141242-42144549	retained_intron
	ENST00000612115 (CYP2D7P-201)	42140205-42144577	protein_coding
	ENST00000614967 (CYP2D7P-202)	42140205-42144554	protein_coding
ENSG00000226450 (CYP2D8P) cytochrome P450, family 2, subfamily D, polypeptide 8, pseudogene	ENST00000433633 (CYP2D8P-001)	42149886-42155001	unprocessed_pseudogene
ENSG00000233903 (Z83851.4)	ENST00000420096 (Z83851.4-001)	42276355-42277052	lincRNA
ENSG00000273366 (CTA-989H11.1)	ENST00000609564 (CTA-989H11.1-001)	42278188-42278846	lincRNA

CIL_0004LO_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000022445-ENSMUSG00000041852	CGP	10090	15:82790107-82912134
Gene	Transcript	Position	Biotype
ENSMUSG00000022445 (Cyp2d26) cytochrome P450, family 2, subfamily d, polypeptide 26	ENSMUST00000006094 (Cyp2d26-201)	82790107-82794245	protein_coding
ENSMUSG00000041852 (Tcf20) transcription factor 20	ENSMUST00000048966 (Tcf20-201)	82808629-82912134	protein_coding
ENSMUSG00000041852 (Tcf20) transcription factor 20	ENSMUST00000109510 (Tcf20-202)	82808629-82912134	protein_coding
ENSMUSG00000100199 (RP23-223M20.2) predicted gene, 20324	ENSMUST00000186291 (RP23-223M20.2-001)	82899080-82905818	antisense

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000100197

ENST00000359033

N/A

0.261±0.00

N/A

0.142±0.00

25.317±0.00

32.943±0.00

0.393±0.00

N/A

0.261±0.00

ENST00000360124

0.099±0.00

N/A

0.199±0.00

N/A

0.493±0.00

0.042±0.00

N/A

0.367±0.00

0.109±0.04

0.895±0.00

ENST00000360608

N/A

0.456±0.00

N/A

107.376±0.00

19.153±0.00

N/A

ENST00000389970

N/A

0.126±0.00

N/A

ENST00000488442

N/A

0.187±0.00

N/A

0.048±0.01

0.053±0.02

N/A

0.068±0.00

0.579±0.00

0.045±0.00

0.031±0.00

N/A

ENSG00000100207

ENST00000335626

N/A

2.312±0.00

4.402±0.00

N/A

0.423±0.00

1.527±0.00

3.169±0.00

0.567±0.00

0.692±0.00

1.765±0.00

N/A

1.525±0.00

ENST00000359486

1.128±0.00

N/A

0.720±0.00

2.172±0.97

1.162±0.00

1.018±0.22

0.908±0.00

1.762±0.89

1.271±0.70

2.529±2.03

N/A

2.025±0.64

0.796±0.00

8.536±0.40

ENST00000404876

N/A

5.298±0.00

N/A

ENST00000515426

N/A

ENSG00000182057

ENST00000332965

0.144±0.00

0.308±0.00

N/A

0.051±0.03

N/A

0.090±0.00

N/A

0.195±0.00

N/A

0.072±0.00

0.152±0.07

0.479±0.36

ENST00000415205

N/A

0.067±0.00

N/A

0.175±0.00

2.440±0.00

0.235±0.00

N/A

0.161±0.00

0.331±0.17

0.342±0.00

ENST00000446578

N/A

0.546±0.08

N/A

0.067±0.00

N/A

ENSG00000205702

ENST00000358097

N/A

0.202±0.00

0.223±0.00

N/A

7.702±0.00

N/A

0.125±0.00

ENST00000424775

N/A

ENST00000433992

0.089±0.00

N/A

0.013±0.00

N/A

0.136±0.06

ENST00000435101

0.081±0.00

0.370±0.00

N/A

0.399±0.00

N/A

0.169±0.00

N/A

19.304±19.02

5.779±0.00

N/A

0.391±0.23

0.112±0.02

0.149±0.00

ENST00000435688

N/A

0.562±0.00

0.030±0.00

N/A

0.296±0.00

N/A

ENST00000610593

N/A

0.443±0.00

N/A

0.253±0.00

0.098±0.00

N/A

0.063±0.00

0.367±0.00

2.347±2.21

0.374±0.00

N/A

0.992±0.00

0.096±0.02

0.215±0.00

ENST00000612115

0.098±0.00

N/A

0.013±0.00

N/A

0.143±0.07

ENST00000614967

N/A

0.074±0.00

0.142±0.00

N/A

0.141±0.00

N/A

ENSG00000226450

ENST00000433633

0.059±0.00

0.286±0.00

N/A

0.135±0.00

0.297±0.00

0.078±0.01

0.089±0.00

0.119±0.00

0.407±0.00

0.206±0.00

N/A

0.244±0.18

0.049±0.00

0.425±0.24

ENSG00000233903

ENST00000420096

0.483±0.00

0.928±0.00

N/A

1.307±0.00

0.331±0.00

N/A

0.217±0.00

0.273±0.00

2.088±0.00

0.437±0.12

N/A

0.221±0.07

0.358±0.25

0.263±0.00

ENSG00000273366

ENST00000609564

0.137±0.00

0.347±0.00

0.565±0.00

N/A

0.091±0.00

0.028±0.00

0.268±0.16

0.272±0.00

0.160±0.03

0.085±0.00

N/A

0.309±0.04

0.391±0.05

0.422±0.14

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000022445

ENSMUST00000006094

0.131±0.06

0.361±0.29

0.059±0.04

0.053±0.00

1.516±1.24

18.705±6.32

0.162±0.10

327.846±25.77

581.036±412.22

0.320±0.13

0.068±0.06

0.348±0.25

0.376±0.34

11.377±5.16

ENSMUSG00000041852

ENSMUST00000048966

6.811±1.18

6.455±1.19

3.114±0.00

4.435±0.70

8.097±1.63

6.904±1.15

1.647±0.23

6.639±1.36

3.894±1.71

6.540±0.75

0.354±0.17

8.397±1.98

21.784±9.53

3.335±0.90

ENSMUST00000109510

N/A

1.099±0.00

N/A

11.491±3.17

N/A

1.097±0.18

1.085±0.32

0.966±0.00

N/A

0.960±0.22

0.865±0.00

N/A

5.865±2.33

ENSMUSG00000100199

ENSMUST00000186291

0.315±0.18

0.248±0.06

0.149±0.00

0.205±0.06

3.225±1.44

0.784±0.26

0.190±0.05

0.897±0.41

0.591±0.12

1.229±0.11

0.099±0.05

0.555±0.32

0.685±0.51

2.317±1.07

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

Loading