C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, RAN-binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359653 ZRANB1-001 ENSG00000019995 9606 + 10:124942123-124988189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyOvaryENST00000359653
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Ovary
ENST00000359653 1.994±0.00 1.444±0.00 1.516±0.00 2.181±0.00 1.306±0.00 2.739±0.00 4.308±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084V CIL_00084V_0001 VISTA 10:124437964-125038882
CIL_0001V2 CIL_0001V2_0001 CGP 10:124801785-124988189
CIL_0009BC CIL_0009BC_0001 VISTA 10:124916753-125517434
CIL_0003UU CIL_0003UU_0001 CGP 10:124942123-125161170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004221 IMP ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007010 IMP cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016477 IMP cell migration
GO:0022604 IMP regulation of cell morphogenesis
GO:0030177 IMP positive regulation of Wnt signaling pathway
GO:0035523 IDA protein K29-linked deubiquitination
GO:0070530 IDA K63-linked polyubiquitin binding
GO:0070536 IMP protein K63-linked deubiquitination
GO:0071947 IMP protein deubiquitination involved in ubiquitin-dependent protein catabolic process
GO:1990168 IDA protein K33-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106157 Zranb1-001 protein_coding Mus_musculus 0 3262
ENSMUST00000033265 Zranb1-201 protein_coding Mus_musculus 0 3210
ENSMUST00000153335 Zranb1-002 retained_intron Mus_musculus 0 510

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