C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, RAN-binding domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000019995 ZRANB1 9606 + 10:124942123-124988189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359653 ZRANB1-001 124942123-124988189 protein_coding
  ENST00000471421 ZRANB1-002 124981411-124983496 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyOvaryENST00000359653
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Ovary
ENST00000359653 1.994±0.00 1.444±0.00 1.516±0.00 2.181±0.00 1.306±0.00 2.739±0.00 4.308±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084V CIL_00084V_0001 VISTA 10:124437964-125038882
CIL_0001V2 CIL_0001V2_0001 CGP 10:124801785-124988189
CIL_0009BC CIL_0009BC_0001 VISTA 10:124916753-125517434
CIL_0003UU CIL_0003UU_0001 CGP 10:124942123-125161170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004221 IMP ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007010 IMP cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016477 IMP cell migration
GO:0022604 IMP regulation of cell morphogenesis
GO:0030177 IMP positive regulation of Wnt signaling pathway
GO:0035523 IDA protein K29-linked deubiquitination
GO:0070530 IDA K63-linked polyubiquitin binding
GO:0070536 IMP protein K63-linked deubiquitination
GO:0071947 IMP protein deubiquitination involved in ubiquitin-dependent protein catabolic process
GO:1990168 IDA protein K33-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060257 CABZ01057907.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000063190 zranb1b zinc finger, RAN-binding domain containing 1b protein_coding Danio_rerio
ENSMUSG00000030967 Zranb1 zinc finger, RAN-binding domain containing 1 protein_coding Mus_musculus

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