C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stannin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329565 SNN-001 ENSG00000184602 9606 + 16:11668414-11679159 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329565 31.354±0.00 19.735±0.00 1.352±0.00 39.886±29.40 18.740±16.25 7.270±6.06 5.470±4.50 6.345±4.09 3.525±0.21 14.924±11.90 25.667±0.00 8.012±6.17 5.615±0.78 5.800±3.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HQ CIL_0007HQ_0002 CGP 16:11547722-11679159
CIL_00059Z CIL_00059Z_0001 CGP 16:11668414-11742878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005741 IEA mitochondrial outer membrane
GO:0006950 TAS response to stress
GO:0009628 TAS response to abiotic stimulus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089011 Snn-201 protein_coding Mus_musculus 0 728
ENSMUST00000038424 Txndc11-001 protein_coding Mus_musculus 1e-26 126

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