C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stannin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089011 Snn-201 ENSMUSG00000037972 10090 + 16:11066298-11074983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089011 22.411±2.07 11.629±2.47 11.232±1.78 72.900±20.82 31.781±11.60 6.665±0.78 11.207±0.29 33.202±1.93 3.228±0.82 28.925±2.50 2.020±1.33 18.240±3.95 4.686±1.45 9.668±4.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HQ CIL_0007HQ_0003 CGP 16:10959275-11074983
CIL_00059Z CIL_00059Z_0002 CGP 16:11066298-11134650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005741 IEA mitochondrial outer membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283033 TXNDC11-001 protein_coding Homo_sapiens 3e-22 111
ENST00000329565 SNN-001 protein_coding Homo_sapiens 0 728
ENST00000356957 TXNDC11-002 protein_coding Homo_sapiens 1e-21 110
ENST00000570917 TXNDC11-006 processed_transcript Homo_sapiens 5e-22 110

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