C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290583 CELF3-001 ENSG00000159409 9606 - 1:151702405-151716814 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryPlacentaTestisENST00000290583
Transcript ID Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000290583 3.508±0.91 0.094±0.02 0.047±0.00 0.007±0.00 0.023±0.00 0.140±0.11 0.072±0.00 0.103±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000381 IDA regulation of alternative mRNA splicing, via spliceosome
GO:0000398 NAS mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IMP RNA binding
GO:0003729 NAS mRNA binding
GO:0005634 NAS nucleus
GO:0005737 IDA cytoplasm
GO:0007283 IEA spermatogenesis
GO:0008380 IMP RNA splicing
GO:0030317 IEA sperm motility
GO:0048026 IDA positive regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029784 Celf3-201 protein_coding Mus_musculus 0 3129
ENSDART00000039629 celf3a-001 protein_coding Danio_rerio 0 466

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