C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cugbp, Elav-like family member 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000039629 celf3a-001 ENSDARG00000034668 7955 - 19:9439193-9503224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000039629
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000039629 23.501±11.92 2.650±0.88 0.558±0.35 0.261±0.00 2.154±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0048026 ISS positive regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118763 Celf5-001 protein_coding Mus_musculus 2e-40 172
ENSMUST00000119060 Celf5-004 protein_coding Mus_musculus 2e-40 172
ENSMUST00000120508 Celf5-003 protein_coding Mus_musculus 9.99995e-41 172
ENSMUST00000120856 Celf5-002 protein_coding Mus_musculus 2e-40 172
ENST00000290583 CELF3-001 protein_coding Homo_sapiens 0 466
ENST00000290585 CELF3-002 protein_coding Homo_sapiens 0 466
ENST00000420342 CELF3-003 protein_coding Homo_sapiens 0 451
ENST00000478829 CELF3-007 processed_transcript Homo_sapiens 4e-21 106
ENST00000479893 CELF3-005 processed_transcript Homo_sapiens 0 449

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