C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000285018 WNT7A-001 ENSG00000154764 9606 - 3:13816258-13880121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLungOvaryPlacentaTestisENST00000285018
Transcript ID Adipose Adrenal Brain Kidney Lung Ovary Placenta Testis
ENST00000285018 0.004±0.00 0.049±0.00 0.823±0.03 0.057±0.00 0.358±0.02 0.142±0.08 5.579±0.47 0.417±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VF CIL_0002VF_0002 CGP 3:13549131-13880121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000578 IMP embryonic axis specification
GO:0001502 IDA cartilage condensation
GO:0001525 IEA angiogenesis
GO:0002062 IDA chondrocyte differentiation
GO:0005102 IPI:IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005125 IDA cytokine activity
GO:0005515 IEA protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005796 TAS Golgi lumen
GO:0005886 TAS plasma membrane
GO:0007269 IEA neurotransmitter secretion
GO:0007275 IEA multicellular organismal development
GO:0007548 TAS sex differentiation
GO:0008105 IEA asymmetric protein localization
GO:0008284 IEA positive regulation of cell proliferation
GO:0009953 IEA dorsal/ventral pattern formation
GO:0009986 IEA cell surface
GO:0010595 IEA positive regulation of endothelial cell migration
GO:0010628 IEA positive regulation of gene expression
GO:0014719 IEA skeletal muscle satellite cell activation
GO:0014834 IEA skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration
GO:0016055 IEA Wnt signaling pathway
GO:0021707 IEA cerebellar granule cell differentiation
GO:0021846 IDA cell proliferation in forebrain
GO:0022009 IEA central nervous system vasculogenesis
GO:0030010 IEA establishment of cell polarity
GO:0030182 IBA neuron differentiation
GO:0030326 IEA embryonic limb morphogenesis
GO:0031012 IEA extracellular matrix
GO:0031133 IEA regulation of axon diameter
GO:0032355 IEA response to estradiol
GO:0035019 IEA somatic stem cell maintenance
GO:0035115 IMP embryonic forelimb morphogenesis
GO:0035116 IMP embryonic hindlimb morphogenesis
GO:0035567 IEA non-canonical Wnt signaling pathway
GO:0035659 IDA Wnt signaling pathway involved in wound healing, spreading of epidermal cells
GO:0042060 IEA wound healing
GO:0042127 IEA regulation of cell proliferation
GO:0042733 IMP embryonic digit morphogenesis
GO:0043066 IEA negative regulation of apoptotic process
GO:0043627 IEA response to estrogen
GO:0045165 IBA cell fate commitment
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046330 IBA positive regulation of JNK cascade
GO:0048018 IC receptor agonist activity
GO:0048103 IEA somatic stem cell division
GO:0048864 IDA stem cell development
GO:0050768 IDA negative regulation of neurogenesis
GO:0050770 IEA regulation of axonogenesis
GO:0050808 IEA synapse organization
GO:0051216 IEA cartilage development
GO:0051965 IDA positive regulation of synapse assembly
GO:0060021 IMP palate development
GO:0060054 IDA positive regulation of epithelial cell proliferation involved in wound healing
GO:0060065 IEA uterus development
GO:0060066 IEA oviduct development
GO:0060070 IDA canonical Wnt signaling pathway
GO:0060173 IEA limb development
GO:0061038 IEA uterus morphogenesis
GO:0070307 ISS lens fiber cell development
GO:0071560 IEP cellular response to transforming growth factor beta stimulus
GO:0090263 IEA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032180 Wnt7a-001 protein_coding Mus_musculus 0 1666
ENSMUST00000109424 Wnt7b-202 protein_coding Mus_musculus 0 728
ENSMUST00000167968 Wnt7b-203 protein_coding Mus_musculus 0 728
ENSMUST00000023015 Wnt7b-201 protein_coding Mus_musculus 0 728
ENSDART00000122986 wnt5b-202 protein_coding Danio_rerio 0.000000003 69
ENSDART00000041852 wnt5b-201 protein_coding Danio_rerio 0.000000003 69
ENSDART00000074651 wnt5b-003 protein_coding Danio_rerio 0.000000003 69

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