C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GEF with PH domain and SH3 binding motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259351 RALGPS1-001 ENSG00000136828 9606 + 9:126914774-127223164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000259351
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000259351 0.134±0.00 0.324±0.00 2.222±0.67 0.117±0.00 0.228±0.00 0.812±0.59 0.877±0.70 0.564±0.00 0.081±0.00 0.490±0.21 0.537±0.00 3.655±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075D CIL_00075D_0001 CGP 9:126914774-127223166

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 NAS:IEA guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008321 IDA Ral guanyl-nucleotide exchange factor activity
GO:0032485 IDA regulation of Ral protein signal transduction
GO:0032852 IDA positive regulation of Ral GTPase activity
GO:0035556 NAS intracellular signal transduction
GO:0043547 NAS positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113165 Ralgps1-004 protein_coding Mus_musculus 0 2915
ENSMUST00000091039 Ralgps1-002 protein_coding Mus_musculus 0 1821
ENSMUST00000131298 Ralgps1-005 protein_coding Mus_musculus 0 1495
ENSMUST00000042615 Ralgps1-001 protein_coding Mus_musculus 0 1134
ENSMUST00000113164 Ralgps1-003 protein_coding Mus_musculus 0 979
ENSMUST00000138704 Ralgps1-006 processed_transcript Mus_musculus 0 287

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