C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GEF with PH domain and SH3 binding motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091039 Ralgps1-002 ENSMUSG00000038831 10090 - 2:33136973-33371478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungOvaryTestisENSMUST00000091039
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Ovary Testis
ENSMUST00000091039 0.855±0.00 4.421±0.00 0.961±0.00 0.930±0.20 0.534±0.00 0.769±0.00 0.719±0.00 1.016±0.26 12.424±4.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075D CIL_00075D_0002 CGP 2:33133421-33371486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008321 IEA Ral guanyl-nucleotide exchange factor activity
GO:0032485 IEA regulation of Ral protein signal transduction
GO:0032852 IEA positive regulation of Ral GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098840 ralgps1-001 protein_coding Danio_rerio 0 603
ENST00000259351 RALGPS1-001 protein_coding Homo_sapiens 0 1821
ENST00000319107 RALGPS1-009 protein_coding Homo_sapiens 0 523
ENST00000373434 RALGPS1-002 protein_coding Homo_sapiens 0 1480
ENST00000373436 RALGPS1-007 protein_coding Homo_sapiens 0 1373
ENST00000373439 RALGPS1-008 retained_intron Homo_sapiens 0 1088
ENST00000394011 RALGPS1-012 protein_coding Homo_sapiens 0 420
ENST00000394022 RALGPS1-006 protein_coding Homo_sapiens 0 1406
ENST00000424082 RALGPS1-201 protein_coding Homo_sapiens 0 1581
ENST00000438723 RALGPS1-005 protein_coding Homo_sapiens 0 913
ENST00000471643 RALGPS1-004 processed_transcript Homo_sapiens 0 351
ENST00000472427 RALGPS1-010 processed_transcript Homo_sapiens 0 420
ENST00000477700 RALGPS1-011 processed_transcript Homo_sapiens 0 455
ENST00000480993 RALGPS1-013 processed_transcript Homo_sapiens 0 355

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