C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scratch family zinc finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000246104 SCRT2-001 ENSG00000215397 9606 - 20:661596-676179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000246104
Transcript ID Brain
ENST00000246104 2.943±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000790 ISS nuclear chromatin
GO:0001078 IC RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:1902042 ISS negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001222 IEA regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064061 Scrt2-001 protein_coding Mus_musculus 0 1443
ENSMUST00000164703 Scrt1-202 protein_coding Mus_musculus 0 477
ENSMUST00000096365 Scrt1-201 protein_coding Mus_musculus 0 477
ENSDART00000033127 scrt1a-201 protein_coding Danio_rerio 0 361

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