C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scratch homolog 2, zinc finger protein (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064061 Scrt2-001 ENSMUSG00000060257 10090 + 2:152081529-152095802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000064061
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000064061 0.007±0.00 0.080±0.06 0.011±0.00 19.885±12.41 0.031±0.02 0.008±0.00 0.021±0.01 0.027±0.04 0.008±0.00 0.027±0.01 0.005±0.00 0.120±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PI CIL_0000PI_0002 CGP 2:151996511-152095802
CIL_0000NP CIL_0000NP_0002 CGP 2:152081529-152111376

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:2001222 IMP regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000033127 scrt1a-201 protein_coding Danio_rerio 0 351
ENSDART00000058829 scrt1b-001 protein_coding Danio_rerio 0 278
ENST00000246104 SCRT2-001 protein_coding Homo_sapiens 0 1443
ENST00000569446 SCRT1-001 protein_coding Homo_sapiens 0 573

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