C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radial spoke head 4 homolog A (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000229554 RSPH4A-002 ENSG00000111834 9606 + 6:116616487-116632978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungOvaryTestisENST00000229554
Transcript ID Adrenal Brain Breast Colon Kidney Lung Ovary Testis
ENST00000229554 0.155±0.00 0.278±0.15 0.198±0.00 0.091±0.00 0.271±0.00 1.866±0.57 4.272±0.00 1.355±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H0 CIL_0005H0_0001 CGP 6:116616479-116668794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001534 ISS radial spoke
GO:0003341 IMP cilium movement
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005856 IEA cytoskeleton
GO:0005930 IC axoneme
GO:0031514 IC motile cilium
GO:0035082 IMP axoneme assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169670 Rsph4a-201 protein_coding Mus_musculus 0 1777
ENSMUST00000118315 Rsph4a-001 protein_coding Mus_musculus 0 1777

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