C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radial spoke head 4 homolog A (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169670 Rsph4a-201 ENSMUSG00000039552 10090 + 10:33905111-33916021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000169670
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000169670 0.017±0.00 0.092±0.02 0.533±0.03 0.195±0.03 0.039±0.01 0.135±0.05 0.053±0.03 0.232±0.17 1.640±0.33 1.212±0.62 0.069±0.03 0.060±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H0 CIL_0005H0_0002 CGP 10:33905111-33951212

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001534 ISS radial spoke
GO:0003341 IEA cilium movement
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005856 IEA cytoskeleton
GO:0035082 IEA axoneme assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229554 RSPH4A-002 protein_coding Homo_sapiens 0 1777
ENST00000344581 KLHL33-001 protein_coding Homo_sapiens 0.000009 57
ENST00000368581 RSPH4A-201 protein_coding Homo_sapiens 0 1288

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