C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, nicotinic, delta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186373 Chrnd-002 ENSMUSG00000026251 10090 + 1:87190844-87200069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverOvaryTestisENSMUST00000186373
Transcript ID Colon Kidney Liver Ovary Testis
ENSMUST00000186373 0.005±0.00 0.001±0.00 0.001±0.00 0.144±0.05 0.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HT CIL_0003HT_0002 CGP 1:87183313-87200070
CIL_0003HU CIL_0003HU_0002 CGP 1:87190607-87212694

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258385 CHRND-001 protein_coding Homo_sapiens 0 1683
ENST00000412233 CHRND-004 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000441621 CHRND-002 nonsense_mediated_decay Homo_sapiens 0 1160
ENST00000446616 CHRND-005 nonsense_mediated_decay Homo_sapiens 0 1421
ENST00000449596 CHRND-003 protein_coding Homo_sapiens 0 327
ENST00000543200 CHRND-201 protein_coding Homo_sapiens 0 1524

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