C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji, AT rich interactive domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174683 Jarid2-005 ENSMUSG00000038518 10090 + 13:44731370-44921640 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungOvaryENSMUST00000174683
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Ovary
ENSMUST00000174683 0.618±0.03 1.211±0.50 0.843±0.02 0.899±0.20 0.326±0.02 0.519±0.03 0.509±0.12 1.004±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003I7 CIL_0003I7_0002 CGP 13:43785107-44921643
CIL_0008HW CIL_0008HW_0002 VISTA 13:44611410-45213085
CIL_0001BY CIL_0001BY_0004 CGP 13:44729474-45002096

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089836 jarid2b-201 protein_coding Danio_rerio 1e-35 158
ENSDART00000147627 jarid2b-001 protein_coding Danio_rerio 1e-35 158
ENSDART00000086333 jarid2a-001 protein_coding Danio_rerio 1e-29 137
ENST00000341776 JARID2-001 protein_coding Homo_sapiens 0 3788
ENST00000397311 JARID2-201 protein_coding Homo_sapiens 0 3339
ENST00000474854 JARID2-002 processed_transcript Homo_sapiens 0 265

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