C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Alstrom syndrome 1, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161983 Alms1-ps2-001 ENSMUSG00000090098 10090 + 6:85774393-85804057 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000161983
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000161983 0.043±0.01 0.093±0.05 0.140±0.00 0.196±0.10 0.021±0.00 0.042±0.00 0.014±0.00 0.032±0.00 0.005±0.00 0.053±0.03 0.171±0.18 1.334±1.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000428767 ALMS1P-001 transcribed_unprocessed_pseudogene Homo_sapiens 1e-16 92
ENST00000450720 ALMS1P-002 processed_transcript Homo_sapiens 4e-19 100

Loading