C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, L type, alpha 1S subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161700 Cacna1s-004 ENSMUSG00000026407 10090 + 1:136105406-136112058 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLiverOvaryPlacentaTestisENSMUST00000161700
Transcript ID Adipose Adrenal Liver Ovary Placenta Testis
ENSMUST00000161700 0.025±0.00 0.145±0.08 0.015±0.01 1.177±0.60 0.120±0.03 3.228±0.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089956 cacna1da-201 protein_coding Danio_rerio 0 532
ENSDART00000100118 cacna1da-202 protein_coding Danio_rerio 0 532
ENSDART00000058276 cacna1da-001 protein_coding Danio_rerio 0 532
ENSDART00000028856 cacna1c-201 protein_coding Danio_rerio 0 344
ENSDART00000132909 cacna1c-001 protein_coding Danio_rerio 0 344
ENST00000362061 CACNA1S-001 protein_coding Homo_sapiens 0 1002
ENST00000367338 CACNA1S-002 protein_coding Homo_sapiens 0 1002

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