| Transcript ID | Brain | Placenta |
|---|---|---|
| ENSMUST00000161159 | 53.599±0.00 | 43.517±5.11 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ataxin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000161159  |
Atxn2-012 |
ENSMUSG00000042605 |
10090 | + |
5:121803008-121814631  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TJ | CIL_0008TJ_0002 | VISTA | 5:121625608-122227679 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | IDA | cytoplasm |
| GO:0021702 | IMP | cerebellar Purkinje cell differentiation |
| GO:0040015 | IMP | negative regulation of multicellular organism growth |
| GO:0048471 | IDA | perinuclear region of cytoplasm |
| GO:0048812 | IMP | neuron projection morphogenesis |
| GO:0048872 | IMP | homeostasis of number of cells |
| GO:0050905 | IMP | neuromuscular process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000377617
|
ATXN2-001 | protein_coding | Homo_sapiens | 0 | 660 |
|
ENST00000389153
|
ATXN2-002 | protein_coding | Homo_sapiens | 0 | 660 |
|
ENST00000389154
|
ATXN2-004 | protein_coding | Homo_sapiens | 0 | 1009 |
|
ENST00000468920
|
ATXN2-015 | retained_intron | Homo_sapiens | 0 | 475 |
|
ENST00000475132
|
ATXN2-013 | protein_coding | Homo_sapiens | 6e-23 | 111 |
|
ENST00000482777
|
ATXN2-006 | retained_intron | Homo_sapiens | 0 | 475 |
|
ENST00000483311
|
ATXN2-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 660 |
|
ENST00000484991
|
ATXN2-014 | retained_intron | Homo_sapiens | 0 | 357 |
|
ENST00000535949
|
ATXN2-016 | protein_coding | Homo_sapiens | 0 | 475 |
|
ENST00000542287
|
ATXN2-011 | protein_coding | Homo_sapiens | 0 | 662 |
|
ENST00000550104
|
ATXN2-201 | protein_coding | Homo_sapiens | 0 | 660 |
|
ENST00000550844
|
ATXN2-012 | protein_coding | Homo_sapiens | 0 | 660 |
|
ENST00000550889
|
ATXN2-023 | retained_intron | Homo_sapiens | 0 | 237 |
|
ENST00000551551
|
ATXN2-024 | retained_intron | Homo_sapiens | 0 | 285 |
|
ENST00000551755
|
ATXN2-021 | nonsense_mediated_decay | Homo_sapiens | 4.2039e-45 | 185 |
|
ENST00000608853
|
ATXN2-025 | protein_coding | Homo_sapiens | 0 | 660 |
|
ENST00000616825
|
ATXN2-202 | protein_coding | Homo_sapiens | 0 | 475 |
