C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ataxin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000551755  |
ATXN2-021 |
ENSG00000204842 |
9606 | - |
12:111464662-111486824  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TJ | CIL_0008TJ_0001 | VISTA | 12:110911282-111513646 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000051950
|
Atxn2-001 | protein_coding | Mus_musculus | 0 | 455 |
|
ENSMUST00000162327
|
Atxn2-007 | protein_coding | Mus_musculus | 0 | 409 |
|
ENSMUST00000161064
|
Atxn2-002 | protein_coding | Mus_musculus | 0 | 409 |
|
ENSMUST00000161159
|
Atxn2-012 | protein_coding | Mus_musculus | 4.2039e-45 | 185 |
|
ENSMUST00000161872
|
Atxn2-008 | retained_intron | Mus_musculus | 1e-20 | 104 |
|
ENSMUST00000159928
|
Atxn2-013 | retained_intron | Mus_musculus | 4e-20 | 102 |
|
ENSMUST00000160462
|
Atxn2-014 | nonsense_mediated_decay | Mus_musculus | 0.0000009 | 58 |
