C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160716 Csmd3-003 ENSMUSG00000022311 10090 - 15:48254342-48791989 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverLungOvaryPlacentaENSMUST00000160716
Transcript ID Adipose Brain Liver Lung Ovary Placenta
ENSMUST00000160716 0.019±0.00 2.074±0.86 0.023±0.00 0.029±0.00 0.147±0.07 0.013±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RS CIL_0005RS_0002 CGP 15:45106284-48792063
CIL_0005RP CIL_0005RP_0002 CGP 15:47580637-50890463

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297405 CSMD3-001 protein_coding Homo_sapiens 0 2514
ENST00000343508 CSMD3-006 protein_coding Homo_sapiens 0 2115
ENST00000455883 CSMD3-002 protein_coding Homo_sapiens 0 1543
ENST00000462254 CSMD3-009 retained_intron Homo_sapiens 0 523
ENST00000493303 CSMD3-005 retained_intron Homo_sapiens 0 547
ENST00000497026 CSMD3-003 retained_intron Homo_sapiens 0 1637
ENST00000519485 CSMD3-010 processed_transcript Homo_sapiens 0 429

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